Showing the last 30 topics from:

TopicRepliesViewsActivity
QIIME2-amplicon-2025.7 16S PacBio classification issues/discussion795Tue Feb 24 2026
MIMt database for 16S, 18S, ITS, 23S and 28S new release available (March 26)045Wed Mar 18 2026
Annotation and Classifier question1784Wed Mar 18 2026
process killed qiime 2024.5 on Ubuntu 24.04.4 LTS when running on multicore129Wed Mar 11 2026
Integrating V3-V4 and V4 16S datasets for large-scale meta-analysis: Is Greengenes2 the optimal choice for cross-region alignment?187Fri Mar 06 2026
The differences in taxonomy output by the feature-classifier trainer and the full-length trainer784Sun Jan 18 2026
"over-classification" of ASV taxonomy?366Fri Jan 09 2026
pre-trained UNITE ITS classifiers for QIIME 2026.1 (and older!)158549Tue Jan 20 2026
How to perform SILVA V3 classifier training?11212Thu Dec 04 2025
Troubleshoot classification where all ASVs are unassigned?894Tue Dec 02 2025
Evaluate custom taxonomic classifier with RESCRIPt?6116Thu Nov 27 2025
Feature-clasifier V3-V47144Wed Oct 22 2025
MIMt database new release!!! QIIME2 classifiers for markers 16S, ITS, 18S, 23S and 28S0104Mon Nov 03 2025
Trained classifier output not found7112Thu Sep 11 2025
Question about consensus taxonomy assignment in classify-consensus-vsearch9185Thu Aug 21 2025
Is there a pre-trained QIIME 2 classifier with full-length 16S (.qza)?10224Thu Aug 14 2025
Greengenes2 and RESCRIPt3133Wed Jul 09 2025
SILVA 138.1 classifier trained on version 2023.5 and used in 2024.53208Thu Jul 03 2025
16S SRNA179Sat Aug 02 2025
Dealing with Poor Taxonomic Assignments7135Tue Jun 24 2025
Request for Pre-trained SILVA V1–V3 Naive Bayes Classifier391Wed Jun 18 2025
SILVA 138.2 classifier3337Wed May 28 2025
Processing, filtering, and evaluating the SILVA database (and other reference sequence data) with RESCRIPt2664517Mon Jun 23 2025
Classifier code is running without a result358Wed May 21 2025
Classify the phylum of d__Eukaryota;__7121Wed May 21 2025
Inconsitent taxonomic classification698Fri May 16 2025
Shotgun sequencing of Fungi - UNITE or KRAKEN2192Wed Jun 11 2025
Greengenes2 2024.09 phylogenetic tree7290Fri May 02 2025
How does the sklearn classifier handle ambiguous bases?392Sun Apr 27 2025
Almost all Reads are unclassified - custom 18S V4 classifier13231Fri Apr 25 2025